Updating

Added by francisco 8 months ago

Hello every one
After too much time I decide to update to GMT 5.4.x using building GMT 5 with CMake
I didn't succeed on it, when I run make and obtain this message
[100%] Built target supplib
Makefile:149: recipe for target 'all' failed
make: *** [all] Error 2

Any idea what can I do?


Replies (7)

RE: Updating - Added by Joaquim 8 months ago

... post the long error message. Like that it's impossible to know.

RE: Updating - Added by francisco 8 months ago

Hi Joaquim thanks for answer. this is the complete error after runing cmake
Thanks

//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `SSL_get_peer_certificate@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `CRYPTO_num_locks@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `SSL_get_current_compression@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `SSL_CTX_free@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `SSL_CTX_use_certificate_chain_file@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `SSL_get_version@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `BIO_int_ctrl@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `ENGINE_free@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `CRYPTO_get_id_callback@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `ASN1_STRING_data@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `OPENSSL_config@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `SSL_get_error@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `X509_NAME_get_entry@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `SSL_use_PrivateKey_file@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `X509_STORE_load_locations@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpoppler.so.58: undefined reference to `TIFFDefaultStripSize@LIBTIFF_4.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `ASN1_STRING_length@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `SSL_CIPHER_get_name@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `sk_num@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpoppler.so.58: undefined reference to `TIFFFdOpen@LIBTIFF_4.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `SSL_set_ex_data@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpoppler.so.58: undefined reference to `TIFFWriteScanline@LIBTIFF_4.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `SSL_read@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `X509_STORE_set_flags@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `SSLv23_method@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `ENGINE_load_private_key@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `BIO_new@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `BIO_set_flags@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `X509_get_subject_name@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `CRYPTO_get_locking_callback@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `X509_NAME_ENTRY_get_data@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `sk_value@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `CRYPTO_set_id_callback@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpoppler.so.58: undefined reference to `TIFFClose@LIBTIFF_4.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `SSL_CTX_new@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `SSL_CTX_get_cert_store@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `SSL_check_private_key@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `ENGINE_by_id@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `BIO_s_socket@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `ERR_put_error@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `ERR_get_error@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `CRYPTO_set_locking_callback@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `SSL_load_error_strings@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `SSL_new@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `SSL_get_current_cipher@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `BIO_clear_flags@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `SSL_write@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `X509_free@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `SSL_CTX_load_verify_locations@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `SSL_free@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `SSL_ctrl@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpoppler.so.58: undefined reference to `TIFFSetField@LIBTIFF_4.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `ERR_clear_error@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `SSL_set_verify@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `ENGINE_init@OPENSSL_1.0.0'
/usr/lib/gcc/x86_64-linux-gnu/5/../../../../lib/libgdal.so: undefined reference to `sqlite3_column_table_name'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `SSL_CIPHER_get_bits@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `SSL_connect@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `X509_NAME_get_index_by_NID@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `ERR_reason_error_string@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `SSL_set_bio@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `SSL_CTX_ctrl@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `sk_free@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `SSL_pending@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `SSL_use_PrivateKey@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `ENGINE_finish@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `X509_get_ext_d2i@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `SSL_library_init@OPENSSL_1.0.0'
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `SSL_shutdown@OPENSSL_1.0.0'
collect2: error: ld returned 1 exit status
src/CMakeFiles/gmt.dir/build.make:111: recipe for target 'src/gmt' failed
make2: * [src/gmt] Error 1
CMakeFiles/Makefile2:450: recipe for target 'src/CMakeFiles/gmt.dir/all' failed
make1:
[src/CMakeFiles/gmt.dir/all] Error 2
Makefile:149: recipe for target 'all' failed
make: *
* [all] Error 2

RE: Updating - Added by Joaquim 8 months ago

Not easy. Clearly a problem with GDAL and its dependencies. I see references to missing openssl, possibly sqlite. Basically, your GDAL lib is broken.
How to solve it? Try to update your GDAL installation.

RE: Updating - Added by francisco 8 months ago

Thanks
Joaquim

I refixing the libraries to try again.

RE: Updating - Added by francisco 8 months ago

Finally I fixed library by library and I got the correct installation.

But Also I uncommented this lines in ConfigUser.cmake

  1. Installation path (usually defaults to /usr/local) [auto]:
    set (CMAKE_INSTALL_PREFIX "/home/francisco/gmt-dev")

set (GMT_EXCLUDE_GDAL TRUE)
set (GMT_EXCLUDE_PCRE TRUE)
set (GMT_EXCLUDE_FFTW3 TRUE)
set (GMT_EXCLUDE_LAPACK TRUE)
set (GMT_EXCLUDE_ZLIB TRUE)

  1. Set path to GSHHG Shoreline Database [auto]:
    set (GSHHG_ROOT "/usr/share/gmt-gshhg")
  1. Copy GSHHG files to $/coast [FALSE]:
    set (COPY_GSHHG TRUE)
  1. Set path to DCW Digital Chart of the World for GMT [auto]:
    set (DCW_ROOT "/usr/share/gmt-dcw")
  1. Copy DCW files to $/dcw [FALSE]:
    set (COPY_DCW TRUE)

Now It is working. Thanks

RE: Updating - Added by Joaquim 8 months ago

francisco wrote:

Finally I fixed library by library and I got the correct installation.

But Also I uncommented this lines in ConfigUser.cmake

set (GMT_EXCLUDE_GDAL TRUE)

Though you can, you should not do this. GDAL is increasingly import and we are considering make it mandatory.

RE: Updating - Added by francisco 8 months ago

I see.

For the moment I gonna work with this installation provisionally.
But I will try to do the complete installation regarding GDAL later on.

thanks for the warning

(1-7/7)